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Evotec Technologies Acapella Scripts and
Procedures
NEW: Texture analysis
suite
Procedures to calculate Haralick's
texture features, threshold adjacency statistics, and radial moments.
'Colocalisation
Coefficients' procedure
Calculates
Pearson's, Mander's, ICQ and Overlap coefficients for two user defined images
using the area defined by a user selected objects list.
'Background
correction' procedure
Subtracts
the mean intensity of the background from an image. The background is
assumed to be the area outside the user-defined object list. By Karsten Kottig,
Evotec.
NEW: Also includes a Rolling Ball
like algorithm for background correction.
'Cell
segmentation' example script
Illustrates how to:
- generate stencils of different
subcellular compartments
- calculate mean intensity of
different compartments
- calculate the ratio of two
compartments
'Nearest Neighbour' Deblur
Performs a
crude nearest neighbour 'deblur' based on a top, middle and bottom slice.
'Script Bits'
Useful for combining tables,
outputting object-level data to text files, retrieving experimental information.
Please read the
Terms of Use
for this site which covers the MacBiophotonics Website.
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